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36Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPawel Durek, Christian Schudoma, Wolfram Weckwerth, Joachim Selbig, Dirk Walther: Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins. BMC Bioinformatics 10: (2009)
2008
35Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLZoran Nikoloski, Sergio Grimbs, Joachim Selbig, Oliver Ebenhöh: Hardness and Approximability of the Inverse Scope Problem. WABI 2008: 99-112
34Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSteve Dworschak, Susanne Grell, Victoria J. Nikiforova, Torsten Schaub, Joachim Selbig: Modeling Biological Networks by Action Languages via Answer Set Programming. Constraints 13(1-2): 21-65 (2008)
33Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJoshua L. Heazlewood, Pawel Durek, Jan Hummel, Joachim Selbig, Wolfram Weckwerth, Dirk Walther, Waltraud X. Schulze: PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. Nucleic Acids Research 36(Database-Issue): 1015-1021 (2008)
2007
32no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLClaudia Falter, Alexander Schliep, Joachim Selbig, Martin Vingron, Dirk Walther: Proceedings of the German Conference on Bioinformatics, GCB 2007, September 26-28, 2007, Potsdam, Germany. GI 2007
31Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJan Hummel, Michaela Niemann, Stefanie Wienkoop, Waltraud X. Schulze, Dirk Steinhauser, Joachim Selbig, Dirk Walther, Wolfram Weckwerth: ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites. BMC Bioinformatics 8: (2007)
30Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHenning Redestig, Daniel Weicht, Joachim Selbig, Matthew A. Hannah: Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana. BMC Bioinformatics 8: (2007)
29Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRalf Steuer, Adriano Nunes Nesi, Alisdair R. Fernie, Thilo Gross, Bernd Blasius, Joachim Selbig: From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle. Bioinformatics 23(11): 1378-1385 (2007)
28Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLWolfram Stacklies, Henning Redestig, Matthias Scholz, Dirk Walther, Joachim Selbig: pcaMethods - a bioconductor package providing PCA methods for incomplete data. Bioinformatics 23(9): 1164-1167 (2007)
2006
27Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLKirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig: Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV. DILS 2006: 185-194
26Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHenning Redestig, Florian Sohler, Ralf Zimmer, Joachim Selbig: Unsupervised Decision Trees Structured by Gene Ontology (GO-UDTs) for the Interpretation of Microarray Data. GfKl 2006: 585-592
25Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSusanne Grell, Torsten Schaub, Joachim Selbig: Modelling Biological Networks by Action Languages Via Answer Set Programming. ICLP 2006: 285-299
24Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRalf Steuer, Peter Humburg, Joachim Selbig: Validation and functional annotation of expression-based clusters based on gene ontology. BMC Bioinformatics 7: 380 (2006)
23Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMatthias Steinfath, Dirk Repsilber, Manuela Hische, Nicolas Schauer, Alisdair R. Fernie, Joachim Selbig: Metabolite profiles as a reflection of physiological status -- a methodological validation. J. Integrative Bioinformatics 3(2): (2006)
2005
22Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJan Hummel, Nima Keshvari, Wolfram Weckwerth, Joachim Selbig: Species-specific analysis of protein sequence motifs using mutual information. BMC Bioinformatics 6: 164 (2005)
21Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMatthias Scholz, Fatma Kaplan, Charles L. Guy, Joachim Kopka, Joachim Selbig: Non-linear PCA: a missing data approach. Bioinformatics 21(20): 3887-3895 (2005)
20Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNiko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann, Joachim Selbig, Klaus Korn, Hauke Walter, Thomas Berg, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen K. Rockstroh, Bernd Kupfer, Rolf Kaiser, Martin Däumer: Computational methods for the design of effective therapies against drug resistant HIV strains. Bioinformatics 21(21): 3943-3950 (2005)
19Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNiko Beerenwinkel, Jörg Rahnenführer, Rolf Kaiser, Daniel Hoffmann, Joachim Selbig, Thomas Lengauer: Mtreemix: a software package for learning and using mixture models of mutagenetic trees. Bioinformatics 21(9): 2106-2107 (2005)
18Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNiko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer: Learning Multiple Evolutionary Pathways from Cross-Sectional Data. Journal of Computational Biology 12(6): 584-598 (2005)
2004
17no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMatthias Scholz, Yves Gibon, Mark Stitt, Joachim Selbig: Independent components analysis of starch deficient pgm mutants. German Conference on Bioinformatics 2004: 95-104
16Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNiko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer: Learning multiple evolutionary pathways from cross-sectional data. RECOMB 2004: 36-44
15Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLCarsten O. Daub, Ralf Steuer, Joachim Selbig, Sebastian Kloska: Estimating mutual information using B-spline functions - an improved similarity measure for analysing gene expression data. BMC Bioinformatics 5: 118 (2004)
14Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndré Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig: Threshold extraction in metabolite concentration data. Bioinformatics 20(10): 1491-1494 (2004)
13Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDirk Steinhauser, Björn H. Junker, Alexander Lüdemann, Joachim Selbig, Joachim Kopka: Hypothesis-driven approach to predict transcriptional units from gene expression data. Bioinformatics 20(12): 1928-1939 (2004)
12Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMatthias Scholz, S. Gatzek, A. Sterling, Oliver Fiehn, Joachim Selbig: Metabolite fingerprinting: detecting biological features by independent component analysis. Bioinformatics 20(15): 2447-2454 (2004)
11Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAlexander Lüdemann, Daniel Weicht, Joachim Selbig, Joachim Kopka: PaVESy: Pathway Visualization and Editing System. Bioinformatics 20(16): 2841-2844 (2004)
2003
10no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndré Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig: Threshold extraction in metabolite concentration data. German Conference on Bioinformatics 2003: 33-39
9Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNiko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig: Methods for optimizing antiviral combination therapies. ISMB (Supplement of Bioinformatics) 2003: 16-25
8no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLCarsten O. Daub, Sebastian Kloska, Joachim Selbig: MetaGeneAlyse: analysis of integrated transcriptional and metabolite data. Bioinformatics 19(17): 2332-2333 (2003)
7no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNiko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter: Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes. Nucleic Acids Research 31(13): 3850-3855 (2003)
2002
6no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRalph E. Steuer, Jürgen Kurths, Carsten O. Daub, Janko Weise, Joachim Selbig: The mutual information: Detecting and evaluating dependencies between variables. ECCB 2002: 231-240
2001
5no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNiko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig: Identifying drug resistance-associated patterns in HIV genotypes. German Conference on Bioinformatics 2001: 126-130
4Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNiko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig: Geno2pheno: Interpreting Genotypic HIV Drug Resistance Tests. IEEE Intelligent Systems 16(6): 35-41 (2001)
1999
3no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJoachim Selbig, Heinz-Theodor Mevissen, Thomas Lengauer: Decision tree-based formation of consensus protein secondary structure prediction. Bioinformatics 15(12): 1039-1046 (1999)
1986
2no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJoachim Selbig: Knowledge Acquisition by Inductive Learning from Examples. AII 1986: 145-163
1981
1no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFritz Wysotzki, Werner Kolbe, Joachim Selbig: Concept Learning by Structured Examples - An Algebraic Approach. IJCAI 1981: 153-158

Coauthor Index

1Niko Beerenwinkel [4] [5] [7] [9] [16] [18] [19] [20] [27]
2Thomas Berg [20]
3Bernd Blasius [29]
4Patrick Braun [20]
5Joachim Büch [27]
6Carsten O. Daub [6] [8] [15]
7Martin Däumer [7] [9] [16] [18] [20] [27]
8Pawel Durek [33] [36]
9Steve Dworschak [34]
10Oliver Ebenhöh [35]
11Claudia Falter [32]
12Gerd Fätkenheuer [20]
13Alisdair R. Fernie [23] [29]
14Oliver Fiehn [12]
15Roman Fischer [20]
16André Flöter [10] [14]
17S. Gatzek [12]
18Yves Gibon [17]
19Susanne Grell [25] [34]
20Sergio Grimbs [35]
21Thilo Gross [29]
22Charles L. Guy [21]
23Matthew A. Hannah [30]
24Joshua L. Heazlewood [33]
25Manuela Hische [23]
26Daniel Hoffmann [4] [5] [7] [9] [16] [18] [19] [20] [27]
27Peter Humburg [24]
28Jan Hummel [22] [31] [33]
29Björn H. Junker [13]
30Rolf Kaiser [4] [5] [7] [9] [16] [18] [19] [20] [27]
31Fatma Kaplan [21]
32Nima Keshvari [22]
33Sebastian Kloska [8] [15]
34Werner Kolbe [1]
35Joachim Kopka [11] [13] [21]
36Klaus Korn [4] [5] [7] [9] [20]
37Bernd Kupfer [20]
38Jürgen Kurths [6]
39Thomas Lengauer [3] [4] [5] [7] [9] [16] [18] [19] [20] [27]
40Alexander Lüdemann [11] [13]
41Heinz-Theodor Mevissen [3]
42Adriano Nunes Nesi [29]
43Jacques Nicolas [10] [14]
44Michaela Niemann [31]
45Victoria J. Nikiforova [34]
46Zoran Nikoloski [35]
47Mark Oette [7] [20]
48Jörg Rahnenführer [16] [18] [19] [20]
49Henning Redestig [26] [28] [30]
50Dirk Repsilber [23]
51Jürgen K. Rockstroh [20]
52Kirsten Roomp [20] [27]
53Igor Savenkov [20]
54Torsten Schaub [10] [14] [25] [34]
55Nicolas Schauer [23]
56Alexander Schliep [32]
57Barbara Schmidt [4] [5]
58Matthias Scholz [12] [17] [21] [28]
59Christian Schudoma [36]
60Eugen Schülter [27]
61Waltraud X. Schulze [31] [33]
62Saleta Sierra-Aragon [27]
63Tobias Sing [20] [27]
64Florian Sohler [26]
65Wolfram Stacklies [28]
66Matthias Steinfath [23]
67Dirk Steinhauser [13] [31]
68A. Sterling [12]
69Ralf Steuer [15] [24] [29]
70Ralph E. Steuer [6]
71Mark Stitt [17]
72Martin Vingron [32]
73Hauke Walter [4] [5] [7] [9] [20]
74Dirk Walther [28] [31] [32] [33] [36]
75Wolfram Weckwerth [22] [31] [33] [36]
76Daniel Weicht [11] [30]
77Janko Weise [6]
78Stefanie Wienkoop [31]
79Fritz Wysotzki [1]
80Ralf Zimmer [26]

Colors in the list of coauthors

Copyright © Mon Mar 15 21:39:48 2010 by Michael Ley (ley@uni-trier.de)