GCB 2004: Bielefeld, Germany

@proceedings{DBLP:conf/gcb/2004,
  editor    = {Robert Giegerich and
               Jens Stoye},
  title     = {Proceedings of the German Conference on Bioinformatics (GCB 2004),
               Bielefeld, Germany, October 4-6, 2004},
  booktitle = {German Conference on Bioinformatics},
  publisher = {GI},
  series    = {LNI},
  volume    = {53},
  year      = {2004},
  isbn      = {3-88579-382-2},
  bibsource = {DBLP, http://dblp.uni-trier.de}
}

• Dan Gusfield: Invited Talk: Phylogenetic Networks with Constrained and Unconstrained Recombination. 1-2
• Olaf Delgado Friedrichs, Aaron L. Halpern, Ross Lippert, Christian Rausch, Stephan C. Schuster, Daniel H. Huson: Syntenic Layout of Two Assemblies of Related Genomes. 3-12
• Sebastian Böcker: Weighted Sequencing from Compomers: DNA de-novo sequencing from mass spectrometry data in the presence of false negative constraints. 13-24
• Burkhard Morgenstern, Sonja J. Prohaska, Nadine Werner, Jan Weyer-Menkhoff, Isabelle Schneider, Amarendran R. Subramanian, Peter F. Stadler: Multiple sequence alignment with user-defined constraints. 25-36
• James Slack, Kristian Hildebrand, Tamara Munzner, Katherine St. John: SequenceJuxtaposer: Fluid Navigation For Large-Scale Sequence Comparison in Context. 37-42
• Rainer Pudimat, Ernst Günter Schukat-Talamazzini, Rolf Backofen: Feature Based Representation and Detection of Transcription Factor Binding Sites. 43-52
• Michael Beckstette, Dirk Strothmann, Robert Homann, Robert Giegerich, Stefan Kurtz: PoSSuMsearch: Fast and Sensitive Matching of Position Specific Scoring Matrices using Enhanced Suffix Arrays. 53-64
• Hanjo Täubig, Arno Buchner, Jan Griebsch: A Method for Fast Approximate Searching of Polypeptide Structures in the PDB. 65-74
• Nicole Isermann, Michael Weitzel, Wolfgang Wiechert: Kleene's Theorem and the Solution of Metabolic Carbon Labeling Systems. 75-84
• H. Strömbergsson, Peteris Prusis, Herman Midelfart, Jarl E. S. Wikberg, Henryk Jan Komorowski: Proteochemometrics Modeling of Receptor-Ligand Interactions Using Rough Sets. 85-94
• Matthias Scholz, Yves Gibon, Mark Stitt, Joachim Selbig: Independent components analysis of starch deficient pgm mutants. 95-104
• Szymon M. Kielbasa, Nils Blüthgen, Hanspeter Herzel: Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors. 105-114
• Thomas Götz, Andreas Bohne-Lang, Martin Frank, Klaus Karl Lohmann, Alexander Loß, Thomas Lütteke, Claus-Wilhelm von der Lieth: glycosciences.de: An Internet Portal for Glyco-related Data from Open Access Resources. 115-120
• Gert Vriend: Invited Talk: Information Flux Through Proteins. 121-122
• Fabian Bös, Natalia Currle-Linde, Peggy Lindner, Rolf D. Schmid, Jürgen Pleiss: High-throughput molecular dynamics simulations: Long and short range effects of mutations on substrate specificity. 123-130
• Nils Weskamp, Eyke Hüllermeier, Daniel Kuhn, Gerhard Klebe: Graph Alignments: A New Concept to Detect Conserved Regions in Protein Active Sites. 131-140
• Jan E. Gewehr, Niklas von Öhsen, Ralf Zimmer: Combining Secondary Structure Element Alignment and Profile-Profile Alignment for Fold Recognition. 141-148
• Guido Dieterich, Marsel Kvesic, Dietmar Schomburg, Dirk W. Heinz, Joachim Reichelt: Integrating public databases into an existing protein visualization and modeling program - BRAGI. 149-156
• Michael Gagen: Invited Talk: Inherent Size and Complexity Constraints in Prokaryote Gene Regulatory Networks. 159-168
• Ralph Delfs, Andreas Doms, Alexander Kozlenkov, Michael Schroeder: GoPubMed: ontology-based literature search applied to Gene Ontology and PubMed. 169-178
• Michael Beckstette, Alexander Sczyrba, Paul M. Selzer: Genlight: An Interactive System for High-throughput Sequence Analysis and Comparative Genomics. 179-186
• Walter Schubert: Invited Talk: Fast Track to Disease-Specific Drugs? The Impact of In-Situ Proteomics Imaging (Toponomics). 187-188
• Alexander E. Kel, Nico Voss, Tatiana Konovalova, Dmitri Tchekmenev, P. Wabnitz, Olga V. Kel-Margoulis, Edgar Wingender: From Composite Patters to Pathways - Prediction of Key Regulators of Gene Expression. 189-198
• Dirk Koschützki, Falk Schreiber: Comparison of Centralities for Biological Networks. 199-206
• C. Thurner, Ivo L. Hofacker, Peter F. Stadler: Conserved RNA Pseudoknots. 207-216
• Huiquan Wang, Craig J. Benham: Superhelically Destabilized Sites in the E. coli Genome: Implications for Promoter Prediction in Prokaryotes. 217-226
• Peter F. Arndt: Identification and Measurement of Neigbor Dependent Nucleotide Substitution Processes. 227