Luciano Milanesi

2008
29	EE	Antonella Galizia, Federica Viti, Alessandro Orro, Daniele D'Agostino, Ivan Merelli, Luciano Milanesi, Andrea Clematis: TMAinspect, an EGEE Framework for Tissue MicroArray Image Handling. CCGRID 2008: 741-746
28	EE	Daniele D'Agostino, Andrea Clematis, Ivan Merelli, Luciano Milanesi, Matteo Coloberti: A Grid Service based Parallel Molecular Surface Reconstruction System. PDP 2008: 455-462
27	EE	Roberta Alfieri, Ivan Merelli, Ettore Mosca, Luciano Milanesi: The cell cycle DB: a systems biology approach to cell cycle analysis. Nucleic Acids Research 36(Database-Issue): 641-645 (2008)
2007
26	EE	Emanuela Merelli, Giuliano Armano, Nicola Cannata, Flavio Corradini, Mark d'Inverno, Andreas Doms, Phillip W. Lord, Andrew Martin, Luciano Milanesi, Steffen Möller, Michael Schroeder, Michael Luck: Agents in bioinformatics, computational and systems biology. Briefings in Bioinformatics 8(1): 45-59 (2007)
25	EE	Jean-Yves Bansard, Dietrich Rebholz-Schuhmann, Graham Cameron, Dominic Clark, Erik M. van Mulligen, Francesco Beltrame, Eva del Hoyo-Barbolla, Fernando Martín-Sánchez, Luciano Milanesi, Ioannis G. Tollis, Johan van der Lei, Jean-Louis Coatrieux: Medical Informatics and Bioinformatics: A Bibliometric Study. IEEE Transactions on Information Technology in Biomedicine 11(3): 237-243 (2007)
24	EE	Fedor Kolpakov, Vladimir Poroikov, Ruslan Sharipov, Yury Kondrakhin, Alexey Zakharov, Alexey Lagunin, Luciano Milanesi, Alexander E. Kel: CYCLONET - an integrated database on cell cycle regulation and carcinogenesis. Nucleic Acids Research 35(Database-Issue): 550-556 (2007)
2006
23	EE	Nicolas Jacq, Vincent Breton, Hsin-Yen Chen, Li-Yung Ho, Martin Hofmann, Hurng-Chun Lee, Yannick Legré, Simon C. Lin, Astrid Maaß, Emmanuel Medernach, Ivan Merelli, Luciano Milanesi, Giulio Rastelli, Matthieu Reichstadt, Jean Salzemann, Horst Schwichtenberg, Mahendrakar Sridhar, Vinod Kasam, Ying-Ta Wu, Marc Zimmermann: Grid-Enabled High Throughput Virtual Screening. GCCB 2006: 45-59
22	EE	Nicolas Jacq, Vincent Breton, Hsin-Yen Chen, Li-Yung Ho, Martin Hofmann, Hurng-Chun Lee, Yannick Legré, Simon C. Lin, Astrid Maaß, Emmanuel Medernach, Ivan Merelli, Luciano Milanesi, Giulio Rastelli, Matthieu Reichstadt, Jean Salzemann, Horst Schwichtenberg, Mahendrakar Sridhar, Vinod Kasam, Ying-Ta Wu, Marc Zimmermann: Large Scale In Silico Screening on Grid Infrastructures CoRR abs/cs/0611084: (2006)
21		Alessandro Orro, Luciano Milanesi: An Agent System for Automatic Workflows Composition in Grid Environments. ITSSA 1(1): 59-66 (2006)
20	EE	G. A. Trombetti, Ivan Merelli, Luciano Milanesi: High performance cDNA sequence analysis using grid technology. J. Parallel Distrib. Comput. 66(12): 1482-1488 (2006)
2005
19	EE	Ivan Merelli, Luciano Milanesi, Daniele D'Agostino, Andrea Clematis, Marco Vanneschi, Marco Danelutto: Using Parallel Isosurface Extraction in Superficial Molecular Modeling. DFMA 2005: 288-294
18	EE	Igor B. Rogozin, B. A. Malyarchuk, Youri I. Pavlov, Luciano Milanesi: From Context-Dependence of Mutations to Molecular Mechanisms of Mutagenesis. Pacific Symposium on Biocomputing 2005
17	EE	Giuliano Armano, Luciano Milanesi, Alessandro Orro: Using Secondary Structure Information to Perform Multiple Alignment. T. Comp. Sys. Biology: 78-88 (2005)
2003
16		Igor B. Rogozin, Vladimir N. Babenko, Luciano Milanesi, Youri I. Pavlov: Computational analysis of mutation spectra. Briefings in Bioinformatics 4(3): 210-227 (2003)
2002
15		Vadim P. Valuev, Dmitry A. Afonnikov, Mikhail P. Ponomarenko, Luciano Milanesi, Nikolay A. Kolchanov: ASPD (Artificially Selected Proteins/Peptides Database): a database of proteins and peptides evolved in vitro. Nucleic Acids Research 30(1): 200-202 (2002)
2001
14		Igor B. Rogozin, Alexey V. Kochetov, Fyodor A. Kondrashov, Eugene V. Koonin, Luciano Milanesi: Presence of ATG triplets in 5' untranslated regions of eukaryotic cDNAs correlates with a `weak' context of the start codon. Bioinformatics 17(10): 890-900 (2001)
2000
13		Igor B. Rogozin, V. I. Mayorov, M. V. Lavrentieva, Luciano Milanesi, L. R. Adkison: Prediction and Phylogenetic Analysis of Mammalian Short Interspersed Elements (SINEs). Briefings in Bioinformatics 1(3): 260-274 (2000)
1999
12		Luciano Milanesi, D. D'Angelo, Igor B. Rogozin: GeneBuilder: interactive in silico prediction of gene structure. Bioinformatics 15(7): 612-621 (1999)
11		Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Anatoly S. Frolov, Elena A. Ananko, F. A. Kolpakov, Elena V. Ignatieva, Olga A. Podkolodnaya, T. N. Goryachkovskaya, Irina L. Stepanenko, Tatyana I. Merkulova, V. V. Babenko, Y. V. Ponomarenko, Alexey V. Kochetov, Nikolay L. Podkolodny, Denis G. Vorobiev, Sergey V. Lavryushev, Dmitry A. Grigorovich, Y. V. Kondrakhin, Luciano Milanesi, Edgar Wingender, Victor V. Solovyev, G. Christian Overton: Integrated databases and computer systems for studying eukaryotic gene expression. Bioinformatics 15(7): 669-686 (1999)
1998
10		Nikolay A. Kolchanov, Mikhail P. Ponomarenko, Alexander E. Kel, Y. V. Kondrakhin, Anatoly S. Frolov, F. A. Kolpakov, T. N. Goryachkovskaya, O. V. Kel, Elena A. Ananko, Elena V. Ignatieva, Olga A. Podkolodnaya, Vladimir N. Babenko, Irina L. Stepanenko, Aida G. Romashchenko, Tatyana I. Merkulova, Denis G. Vorobiev, Sergey V. Lavryushev, Y. V. Ponomarenko, Alexey V. Kochetov, G. B. Kolesov, Victor V. Solovyev, Luciano Milanesi, Nikolay L. Podkolodny, Edgar Wingender, T. Heinemeyer: GenExpress: A Computer System for Description, Analysis and Recognition of Regulatory Sequences in Eukaryotic Genome. ISMB 1998: 95-104
9		Maria Giuseppina Campi, Paolo Romano, Luciano Milanesi, Domenico Marra, Maria Assunta Manniello, Beatrice Iannotta, Gabriella Rondanina, Elena Grasso, Tiziana Ruzzon, Leonardo Santi: Molecular Probe Data Base (MPDB). Nucleic Acids Research 26(1): 145-147 (1998)
1996
8		Y. V. Kondrakhin, F. A. Kolpakov, Alexander E. Kel, Nikolay A. Kolchanov, Luciano Milanesi: Computer Analysis and Recognition of the Transcription Regulatory Elements in Eukaryotic Genomes. German Conference on Bioinformatics 1996: 247-250
7		Igor B. Rogozin, Luciano Milanesi, Nikolay A. Kolchanov: Gene structure prediction using information on homologous protein sequence. Computer Applications in the Biosciences 12(3): 161-170 (1996)
6		Luciano Milanesi, M. Muselli, P. Arrigo: Hamming-Clustering method for signals prediction in 5' and 3' regions of eukaryotic genes. Computer Applications in the Biosciences 12(5): 399-404 (1996)
1995
5		Alexander E. Kel, Y. V. Kondrakhin, Ph. A. Kolpakov, O. V. Kel, Aida G. Romashchenko, Edgar Wingender, Luciano Milanesi, Nikolay A. Kolchanov: Computer Tool FUNSITE for Analysis of Eukaryotic Regulatory Genomic Sequences. ISMB 1995: 197-205
4		Y. V. Kondrakhin, Alexander E. Kel, Nikolay A. Kolchanov, Aida G. Romashchenko, Luciano Milanesi: Eukaryotic promoter recognition by binding sites for transcription factors. Computer Applications in the Biosciences 11(5): 477-488 (1995)
1994
3		Victor B. Strelets, Andrey A. Ptitsyn, Luciano Milanesi, Hwa A. Lim: Data bank homology search algorithm with linear computation complexity. Computer Applications in the Biosciences 10(3): 319-322 (1994)
1993
2		Alexander E. Kel, Mikhail P. Ponomarenko, E. A. Likhachev, Yuri L. Orlov, I. V. Ischenko, Luciano Milanesi, Nikolay A. Kolchanov: SITEVIDEO: a computer system for functional site analysis and recognition. Investigation of the human splice sites. Computer Applications in the Biosciences 9(6): 617-627 (1993)
1992
1		Victor B. Strelets, Ilya N. Shindyalov, Nikolay A. Kolchanov, Luciano Milanesi: Fast, statistically based alignment of amino acid sequences on the base of diagonal fragments of DOT-matrices. Computer Applications in the Biosciences 8(6): 529-534 (1992)

Coauthor Index

1	L. R. Adkison	[13]
2	Dmitry A. Afonnikov	[15]
3	Roberta Alfieri	[27]
4	Elena A. Ananko	[10] [11]
5	Giuliano Armano	[17] [26]
6	P. Arrigo	[6]
7	V. V. Babenko	[11]
8	Vladimir N. Babenko	[10] [16]
9	Jean-Yves Bansard	[25]
10	Francesco Beltrame	[25]
11	Vincent Breton	[22] [23]
12	Graham Cameron	[25]
13	Maria Giuseppina Campi	[9]
14	Nicola Cannata	[26]
15	Hsin-Yen Chen	[22] [23]
16	Dominic Clark	[25]
17	Andrea Clematis	[19] [28] [29]
18	Jean-Louis Coatrieux	[25]
19	Matteo Coloberti	[28]
20	Flavio Corradini	[26]
21	Daniele D'Agostino	[19] [28] [29]
22	D. D'Angelo	[12]
23	Marco Danelutto	[19]
24	Andreas Doms	[26]
25	Anatoly S. Frolov	[10] [11]
26	Antonella Galizia	[29]
27	T. N. Goryachkovskaya	[10] [11]
28	Elena Grasso	[9]
29	Dmitry A. Grigorovich	[11]
30	T. Heinemeyer	[10]
31	Li-Yung Ho	[22] [23]
32	Martin Hofmann	[22] [23]
33	Eva del Hoyo-Barbolla	[25]
34	Beatrice Iannotta	[9]
35	Elena V. Ignatieva	[10] [11]
36	I. V. Ischenko	[2]
37	Nicolas Jacq	[22] [23]
38	Vinod Kasam	[22] [23]
39	Alexander E. Kel	[2] [4] [5] [8] [10] [24]
40	O. V. Kel	[5] [10]
41	Alexey V. Kochetov	[10] [11] [14]
42	Nikolay A. Kolchanov	[1] [2] [4] [5] [7] [8] [10] [11] [15]
43	G. B. Kolesov	[10]
44	F. A. Kolpakov	[8] [10] [11]
45	Fedor Kolpakov	[24]
46	Ph. A. Kolpakov	[5]
47	Y. V. Kondrakhin	[4] [5] [8] [10] [11]
48	Yury Kondrakhin	[24]
49	Fyodor A. Kondrashov	[14]
50	Eugene V. Koonin	[14]
51	Alexey Lagunin	[24]
52	M. V. Lavrentieva	[13]
53	Sergey V. Lavryushev	[10] [11]
54	Hurng-Chun Lee	[22] [23]
55	Yannick Legré	[22] [23]
56	Johan van der Lei	[25]
57	E. A. Likhachev	[2]
58	Hwa A. Lim	[3]
59	Simon C. Lin	[22] [23]
60	Phillip W. Lord	[26]
61	Michael Luck	[26]
62	Astrid Maaß	[22] [23]
63	B. A. Malyarchuk	[18]
64	Maria Assunta Manniello	[9]
65	Domenico Marra	[9]
66	Andrew Martin	[26]
67	Fernando Martín-Sánchez	[25]
68	V. I. Mayorov	[13]
69	Emmanuel Medernach	[22] [23]
70	Emanuela Merelli	[26]
71	Ivan Merelli	[19] [20] [22] [23] [27] [28] [29]
72	Tatyana I. Merkulova	[10] [11]
73	Steffen Möller	[26]
74	Ettore Mosca	[27]
75	Erik M. van Mulligen	[25]
76	M. Muselli	[6]
77	Yuri L. Orlov	[2]
78	Alessandro Orro	[17] [21] [29]
79	G. Christian Overton	[11]
80	Youri I. Pavlov	[16] [18]
81	Olga A. Podkolodnaya	[10] [11]
82	Nikolay L. Podkolodny	[10] [11]
83	Mikhail P. Ponomarenko	[2] [10] [11] [15]
84	Y. V. Ponomarenko	[10] [11]
85	Vladimir Poroikov	[24]
86	Andrey A. Ptitsyn	[3]
87	Giulio Rastelli	[22] [23]
88	Dietrich Rebholz-Schuhmann	[25]
89	Matthieu Reichstadt	[22] [23]
90	Igor B. Rogozin	[7] [12] [13] [14] [16] [18]
91	Paolo Romano	[9]
92	Aida G. Romashchenko	[4] [5] [10]
93	Gabriella Rondanina	[9]
94	Tiziana Ruzzon	[9]
95	Jean Salzemann	[22] [23]
96	Leonardo Santi	[9]
97	Michael Schroeder	[26]
98	Horst Schwichtenberg	[22] [23]
99	Ruslan Sharipov	[24]
100	Ilya N. Shindyalov	[1]
101	Victor V. Solovyev	[10] [11]
102	Mahendrakar Sridhar	[22] [23]
103	Irina L. Stepanenko	[10] [11]
104	Victor B. Strelets	[1] [3]
105	Ioannis G. Tollis	[25]
106	G. A. Trombetti	[20]
107	Vadim P. Valuev	[15]
108	Marco Vanneschi	[19]
109	Federica Viti	[29]
110	Denis G. Vorobiev	[10] [11]
111	Edgar Wingender	[5] [10] [11]
112	Ying-Ta Wu	[22] [23]
113	Alexey Zakharov	[24]
114	Marc Zimmermann	[22] [23]
115	Mark d'Inverno	[26]

Colors in the list of coauthors