2. WOB 2003: Macaé, RJ, Brazil

Sérgio Lifschitz, Nalvo F. Almeida Jr., Georgios Joannis Pappas Jr., Ricardo Linden (Eds.): II Brazilian Workshop on Bioinformatics, December 3-5, 2003, Macaé, RJ, Brazil. 2003 BibTeX

Genomics data mining

João Piazza, João C. Setubal: New ways for automatic detection of contaminats in EST projects. 1-9 BibTeX
Gustavo E. A. P. A. Batista, Ana L. C. Bazzan, Maria Carolina Monard: Balancing Training Data for Automated Annotation of Keywords: a Case Study. 10-18 BibTeX
Rodrigo Bianchi, Claudia Regina Milaré, André Carlos Ponce Leon Ferreira de Carvalho: E. Coli Promoter Gene Sequence and Human Splice Site Identification with Explanation by Extracting Rules from Trained Artificial Neural Networks. 19-27 BibTeX
Lalinka de C. T. Gomes, Janaína S. de Sousa, George Barreto Bezerra, Leandro Nunes de Castro, Fernando J. Von Zuben: Copt-aiNet and the Gene Ordering Problem. 28-37 BibTeX

Biological data models and Functional analysis

Luciano A. Digiampietri, Claudia Bauzer Medeiros, João C. Setubal: A data model for comparative genomics. 38-46 BibTeX
Luiz Fernando Bessa Seibel, José Antônio Fernandes de Macêdo, Melissa Lemos, Sérgio Lifschitz, Antonio Basílio de Miranda, Marcelo Alves, Wim M. Degrave: A Conceptual Model for Molecular Biology Information. 47-56 BibTeX
Shaila C. Rössle, Paulo Carvalho, Laurent Emmanuel Dardenne, Paulo Mascarello Bisch: Development of a Computational Environment for Protein Structure Prediction and Functional Analysis. 57-63 BibTeX
Natalia Martins: Theoretical studies in a K49 PLA2 from snake venom Bothrops neuwiedi pauloensis. 64-71 BibTeX

Algorithms

Zanoni Dias, João Meidanis: The Syntenic Distance Problem Using Only Fusions and Fussions. 72-79 BibTeX
Carlos E. R. Alves, Edson Cáceres, Siang W. Song: Computing Maximum Subsequence in Parallel. 80-87 BibTeX
Maria Emilia Telles Walter, Mauro C. Sobrinho: Improving the algorithm of Bafna and Pevzner for the problem of sorting by transpositions. 88-96 BibTeX
Celso C. Ribeiro, Dalessandro Soares Vianna: A genetic algorithm for the phylogeny problem using an optimized crossover strategy based on path-relinking. 97-102 BibTeX
Alair Pereira do Lago, Ilya B. Muchnik, Casimir A. Kulikowski: An O(n⁴) algorithm for alignment with non-overlapping inversions. 103-112 BibTeX

Posters

Fábio L. Custódio, Helio J. C. Barbosa, Laurent Emmanuel Dardenne: A Genetic Algorithm applied to the Three-Dimensional HP Protein Folding Model. 113-116 BibTeX
Carlos Azevedo, Alexandre Plastino, Ana Tereza R. Vasconcelos: Procsimo: uma Ferramenta de Procura de Similaridade entre Operons. 117-120 BibTeX
Marcelo Perez, Patrícia Carrião, João C. Setubal: A relational database for COG data. 121-124 BibTeX
Heitor S. Lopes, Adilson Dias: Extracting knowledge from the p53 mutation database: the influence of tabagism in the somatic mutations profile of lung cancer subjects. 125-128 BibTeX
Nalvo F. de Almeida Jr., Luciana Montera: Determinação de regiões ortólogas múltiplas. 129-132 BibTeX
Felipe G. Leite, Luiz A. G. da Costa, Fernanda Araujo Baião, Marta Mattoso: Publishing and Querying Blast Results Using Grid Services. 133-136 BibTeX
Fabricio Teixeira, Maria Cláudia Cavalcanti, Fernanda Araujo Baião, Luiz A. V. C. Meyer, Shaila C. Rössle, Paulo Mascarello Bisch, Marta Mattoso: Data Management via Web Services in Bioinformatics Workflows. 137-140 BibTeX
Fatima Cristina Gonçalves, Marta Mattoso, Maria Cláudia Cavalcanti: Genetic Schema Mapping Support. 141-144 BibTeX
Flavia P. Agostini, Carla Osthoff, Pedro G. Pascutti, Alex Vassalo, Diogo Pinto: A Grid Alternative Solution for Protein Folding Studies Applications. 145-148 BibTeX
Francisco Prosdocimi, Fabiano Peixoto, J. Miguel Ortega: DNA Sequences Base Calling by PHRED: Error. 149-152 BibTeX
Wellington Martins, Simone Vasconcelos, David Bertioli: A Software Tool to Aid in the Search for Intron Markers derived from EST data. 153-156 BibTeX
Tiago Adriano de Knegt López de Prado, Wagner Meira Jr., Marcelo M. Santoro, Márcio de Carvalho, Rodrigo L. Carceroni, Carlos H. Silveira, Raquel C. de Melo, Fabiano A. Fonseca: Using Structural Signatures for Identifying Globins: the Intra-Subunit Electrostatic Interactions. 157-160 BibTeX
Cleverson Veronez, Carla Osthoff, Pedro G. Pascutti: HIV-I Protease Mutants Molecular Dynamics Research on Grid Computing Environment. 161-164 BibTeX
Thiago Rodrigues, Lucila Pacifico, Santuza Teixeira, Sergio Oliveira, Antônio Braga: Amino Acid Coding with Sliding Window Technique. 165-168 BibTeX
Marcos Costa, Roberto C. Togawa, Robson Miranda, Georgios Joannis Pappas Jr.: Distributed blast using grid service technology. 169-172 BibTeX
Rogério Luís de Carvalho Costa, Sérgio Lifschitz: Skew Handling for Parallel BLAST Processing. 173-176 BibTeX